The Clojure tutorial (http://docs.opencv.org/2.4/doc/tutorials/introduction/clojure_dev_intro/clojure_dev_intro.html) specifies how to pack the native libraries, using a specific folder structure.
However, I haven't found in the tutorial where and what is this used for, if at all. Only the main library is loaded:
(clojure.lang.RT/loadLibrary org.opencv.core.Core/NATIVE_LIBRARY_NAME)
What about the native ones? How are they extracted from the jar? In Java, you have to do it manually to the temp folder.