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Special issue was created to notify users about the transfer: https://github.com/Itseez/opencv/issues/4227 together with the similar notification on the code.opencv.org: http://code.opencv.org/projects/opencv/wiki
I've already fixed some of the links on the main wiki page: http://code.opencv.org/projects/opencv/wiki#Issue-Tracking and on the CONTRIBUTE page: http://opencv.org/contribute.html Please, feel free to report any other places to be updated.
As for labeling: yes, you are right, labels can be assigned only by collaborators. I think, this restriction can become very useful, because old tracker contained many incorrectly labeled issues which were hard to determine. Version information can be added in the issue body.
