Protobuf build error OpenCV 3.4.2

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Cuda: 9.2 Gcc: 5.4.0 Ubuntu 16.04 Kernel: 4.15.0-24-generic When building OpenCV 3.4.2 with opencv_contrib-3.4.2 I encounter an error which I can't seem to get around.

cmake -D CMAKE_BUILD_TYPE=RELEASE \
    -D CMAKE_INSTALL_PREFIX=/usr/local \
    -D WITH_CUDA=ON \
    -D INSTALL_PYTHON_EXAMPLES=ON \
    -D BUILD_EXAMPLES=ON ..

Log:

[  4%] Building CXX object 3rdparty/protobuf/CMakeFiles/libprotobuf.dir/src/google/protobuf/text_format.cc.o
/home/mikeyr/opencv/opencv-3.4.2/3rdparty/protobuf/src/google/protobuf/text_format.cc:1309:1: error: prototype for ‘google::protobuf::TextFormat::Parser::Parser(bool)’ does not match any in class ‘google::protobuf::TextFormat::Parser’
 TextFormat::Parser::Parser(bool allow_unknown_field)
 ^
In file included from /home/mikeyr/opencv/opencv-3.4.2/3rdparty/protobuf/src/google/protobuf/text_format.cc:43:0:
/home/mikeyr/anaconda3/include/google/protobuf/text_format.h:458:28: error: candidates are: google::protobuf::TextFormat::Parser::Parser(const google::protobuf::TextFormat::Parser&)
   class LIBPROTOBUF_EXPORT Parser {
                            ^
/home/mikeyr/anaconda3/include/google/protobuf/text_format.h:460:5: error:                 google::protobuf::TextFormat::Parser::Parser()
     Parser();
     ^
3rdparty/protobuf/CMakeFiles/libprotobuf.dir/build.make:1262: recipe for target '3rdparty/protobuf/CMakeFiles/libprotobuf.dir/src/google/protobuf/text_format.cc.o' failed
make[2]: *** [3rdparty/protobuf/CMakeFiles/libprotobuf.dir/src/google/protobuf/text_format.cc.o] Error 1
CMakeFiles/Makefile2:543: recipe for target '3rdparty/protobuf/CMakeFiles/libprotobuf.dir/all' failed
make[1]: *** [3rdparty/protobuf/CMakeFiles/libprotobuf.dir/all] Error 2
Makefile:160: recipe for target 'all' failed
make: *** [all] Error 2

When I run with "-D WITH_PROTOBUF=OFF" I run into another error

[ 29%] Building NVCC (Device) object modules/cudawarping/CMakeFiles/cuda_compile.dir/src/cuda/cuda_compile_generated_warp.cu.o
In file included from /usr/local/cuda/include/cuda_runtime.h:86:0,
                 from <command-line>:0:
/usr/local/cuda/include/builtin_types.h:56:26: fatal error: /usr/local/cuda/include/device_types.h: Operation not permitted
compilation terminated.
CMake Error at cuda_compile_generated_remap.cu.o.cmake:208 (message):
  Error generating
  /home/mikeyr/opencv/opencv-3.4.2/build/modules/cudawarping/CMakeFiles/cuda_compile.dir/src/cuda/./cuda_compile_generated_remap.cu.o


modules/cudawarping/CMakeFiles/opencv_cudawarping.dir/build.make:288: recipe for target 'modules/cudawarping/CMakeFiles/cuda_compile.dir/src/cuda/cuda_compile_generated_remap.cu.o' failed
make[2]: *** [modules/cudawarping/CMakeFiles/cuda_compile.dir/src/cuda/cuda_compile_generated_remap.cu.o] Error 1
make[2]: *** Waiting for unfinished jobs....
[ 29%] Built target opencv_freetype
[ 29%] Built target opencv_fuzzy
[ 29%] Linking CXX shared library ../../lib/libopencv_hfs.so
[ 30%] Built target opencv_cudaarithm
[ 30%] Built target opencv_img_hash
[ 30%] Copy Java(JAR) source files
COPYFILES: ... 1 entries (JAVA_SRC_COPY)
COPYFILES:     ... directory '.../gen/java' with 221 files
COPYFILES:         Copying: 'modules/java/jar/opencv/java/org/opencv/imgproc/Moments.java' ...
COPYFILES:         Copying: 'modules/java/jar/opencv/java/org/opencv/imgproc/CLAHE.java' ...
COPYFILES:         Copying: 'modules/java/jar/opencv/java/org/opencv/imgproc/LineSegmentDetector.java' ...
COPYFILES:         Copying: 'modules/java/jar/opencv/java/org/opencv/imgproc/Imgproc.java' ...
COPYFILES:         Copying: 'modules/java/jar/opencv/java/org/opencv/imgproc/Subdiv2D.java' ...
COPYFILES:         Copying: 'modules/java/jar/opencv/java/org/opencv/highgui/HighGui.java' ...
COPYFILES:         Copying: 'modules/java/jar/opencv/java/org/opencv/highgui/ImageWindow.java ...