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Look at this page:

http://docs.opencv.org/modules/highgui/doc/reading_and_writing_images_and_video.html#videocapture

Then scroll for the function VideoCapture::set

• Choose parameter CV_CAP_PROP_FOURCC
• You can set it to whichever encoder that is used in your video

Retrieve four_cc codes at : http://www.fourcc.org/codecs.php