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I've just set up my environment yesterday and plan to start working later on. I have just done the 'hello world' example in this link http://docs.opencv.org/doc/tutorials/introduction/android_binary_package/dev_with_OCV_on_Android.html#dev-with-ocv-on-android

and after searching quite well for this issue I found this article which I have not tried yet:

http://developer.sonymobile.com/knowledge-base/tutorials/android_tutorial/get-started-with-opencv-on-android/

and this is my 2nd prefered link:

http://littlecheesecake.wordpress.com/2012/03/12/display-orientation-issue-when-working-with-opencv-on-android/

All the best and good luck